瑞士苏黎世联邦理工学院2025年博士后招聘（基于3D细胞的组织模拟框架）

Postdoctoral Researcher – 3D Cell-Based Tissue Simulation Framework

ETH Zurich is a world-leading university dedicated to advancing science and technology. The advertised position is based in the Computational Biology (CoBi) group led by Prof. Dagmar Iber, which uses advanced imaging and computational tools to develop data-driven, mechanistic models of biological systems. Located in Basel, the Department of Biosystems Science and Engineering (D-BSSE) provides a vibrant research environment at the interface of biology, engineering, and medicine, and is surrounded by leading pharmaceutical and biotech companies.

Project background

Understanding tissue development through experiments alone is challenging. Cell-based simulations are powerful tools to study how individual cells contribute to tissue structure and dynamics. The Iber group has developed SimuCell3D, an efficient and scalable 3D tissue simulation framework written in C++, that enables the simulation of tissues with up to 100,000 deformable cells—including extracellular matrix and cavities—within a single day [Runser, et al., 2024, Nat Comput Sci 4, 299–309 (2024); Tweetorial].

SimuCell3D represents a major advance in modeling tissue mechanics, cell polarization, and complex morphogenetic processes.

Job description

We are looking for a highly motivated postdoctoral researcher to:

Develop and integrate numerical solvers for reaction-diffusion systems

Extend the existing C++ codebase with additional biophysical features

Apply the framework to morphogenetic problems based on imaging data

Run large-scale simulations on ETH Zurich’s high-performance computing (HPC) infrastructure

Perform model calibration, parameter screening, and validation

Compare simulations to experimental data and prepare high-quality visualizations

Profile

We welcome applications from candidates with:

A PhD in computational science, computational biology, applied mathematics, physics, or a related field

Strong, documented experience in C++ programming and solid software engineering skills — applicants should clearly demonstrate these in their application materials

Familiarity with numerical methods for PDEs (e.g., finite difference or finite element methods)

Experience with tissue simulations and/or HPC is a plus

Interest in biophysics, developmental biology, or cell signaling (prior expertise not required)

A structured, independent, proactive and collaborative working style

We offer

A fully funded position with an internationally competitive salary and excellent benefits, in accordance with ETH Zurich guidelines

Professional development opportunities, including support for grant applications (e.g., SNSF Ambizione) and participation in conferences and workshops

Access to state-of-the-art research infrastructure, including ETH’s high-performance computing (HPC) clusters

A dynamic, interdisciplinary, and collaborative research environment

Flexible working arrangements, including the option for partial remote work

The position is initially offered for one year, with the possibility of annual renewal for up to six years

Working, teaching and research at ETH Zurich

We value diversity

In line with our values, ETH Zurich encourages an inclusive culture. We promote equality of opportunity, value diversity and nurture a working and learning environment in which the rights and dignity of all our staff and students are respected. Visit our Equal Opportunities and Diversity website to find out how we ensure a fair and open environment that allows everyone to grow and flourish.

Curious? So are we.

We look forward to receiving your online application with the following documents:

Letter of Motivation

CV

Diplomas & Transcripts

Contact details of 2 referees

Please note that we exclusively accept applications submitted through our online application portal. Applications via email or postal services will not be considered.

Further information about the group can be found on our website. Questions regarding the position should be directed to Prof Iber by e-mail: iberd@ethz.ch (no applications).

About ETH Zürich

ETH Zurich is one of the world’s leading universities specialising in science and technology. We are renowned for our excellent education, cutting-edge fundamental research and direct transfer of new knowledge into society. Over 30,000 people from more than 120 countries find our university to be a place that promotes independent thinking and an environment that inspires excellence. Located in the heart of Europe, yet forging connections all over the world, we work together to develop solutions for the global challenges of today and tomorrow.

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Job details

Title

Postdoctoral Researcher – 3D Cell-Based Tissue Simulation Framework

Employer

ETH Zürich

Location

Rämistrasse 101 Zurich, Switzerland

Published

2025-06-11

Application deadline

Unspecified

Job type

Postdoc

Field

Bioinformatics, Cell Biology, Computational Biology, Biomedical Engineering, Image Processing and 3 more

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